In the paper "Geometry of the complex of curves II: Hierarchical structure" (Paper) there is a construction of curve complex for an Annular subdomain (2.4). The construction depends on the domain itself but the definition of domain consist of isotopy classes of subsurfaces. So I have the following doubts.
1) Why the construction is unique upto isotopy?
2) Curves are considered upto isotopy, then what do they mean by 'The' core curve?
3) The vertices of curve complex are isotopy classes of curves. Then why the function $\pi_Y$ defined in the next paragraph is well defined?
PS: In para 2.3 they said that "to make discussion clear one might fix a complete hyperbolic metric on $S$." So does this metric assumption is necessary for those constructions or we can do them topologically.