This is only a partial answer: $S'$ is dense in $S$. (As mentioned in the comments, assuming that $K$ is finitely generated over $k$ as a field.)
In fact, a stronger result is true: Let $S_{\mathrm{DVR}}$ be the subspace of all DVRs (i.e. value group isomorphic to $\mathbb{Z}$), then $S_{\mathrm{DVR}}$ is dense in $S$.
This is a direct consequence of the following lemma (Page 487) from the book Algebraic geometry I, schemes with examples and exercises by Ulrich Görtz and Torsten Wedhorn:
Lemma 15.6 Let $A$ be a local integral domain, $K=\mathrm{Frac{A}}$ and let $K'$ be an extension of $K$. There exists a valuation ring $A'$ with $\mathrm{Frac}(A')=K'$ that dominates $A$. If $A$ is in addition noetherian and $K'\supseteq K$ is finitely generated, then we can find a discrete valuation ring $A'$ with $\mathrm{Frac}(A')=K'$ that dominates $A$.
I don't know if $S'$ (or $S_{\mathrm{DVR}}$) is quasi-compact at this moment. But I suspect that it's obvious to experts.