Let $X$ be the affine line with a double origin over $\mathrm{Spec}\,\mathbb Z$. Let $X_\eta$ be its generic fibre, the affine line with a double origin over $\mathrm{Spec}\,\mathbb Q$.
Let $0$ be one of the origins of $X_\eta$.
Are there infinitely many ways of extending $0$ to a section of $X$?
My feeling is that besides taking the closure of $0$ in $X$, we can also alter our choice of origin at some primes. If that feeling is correct, then we would get infinitely many sections of $X\to \mathrm{Spec}\,\mathbb Z$ inducing the same section generically.