Let $E_{1},E_{2}$ be elliptic curves over $\mathbb{C}$. We denote by $\iota_{i}$ the translation by a 2-torsion point on $E_{i}$. Then $G=\mathbb{Z}/2\mathbb{Z}$ acts freely on the the product $E_{1}\times E_{2}$ via the involution $\iota=(\iota_{1},\iota_{2})$. and the quotient $$ X=(E_{1}\times E_{2})/G $$ is a 4-dimensional manifold (complex surface). I would like to understand the intersection form on the middle cohomology $$ (-,-)_{X}:H^2(X,\mathbb{Z})\times H^2(X,\mathbb{Z}) \rightarrow H^4(X,\mathbb{Z})\cong \mathbb{Z} $$ via the cup product. I initially thought
There is a ono-to-one correspondence between $$ H^{2}(X,\mathbb{Z}) > \longleftrightarrow H^{2}(E_{1}\times > E_{2},\mathbb{Z})^{G}, $$ Since the action is free, the intersection form on $H^{2}(X,\mathbb{Z})$ is given by the intersection form on $H^{2}(M\times N,\mathbb{Z})^{G}$ divided by $|G|$. So, any intersection number on $H^{2}(M\times > N,\mathbb{Z})^{G}$ must be a multiple of $|G|=2$.
On the other hand, we have $$ > p_{1}^{*}(\alpha_{E_{1}}), \ > p_{2}^{*}(\alpha_{E_{2}})\in > H^{2}(E_{1}\times > E_{2},\mathbb{Z})^{G} $$ (because $G$ preserves both $E_{1}$ and $E_{2}$) and $$ p_{1}^{*}(\alpha_{E_{1}})\cup > \ > p_{2}^{*}(\alpha_{E_{2}})=\alpha_{E_{1}\times E_{2}} $$ where $H^{\dim_{\mathbb{R}}(M)}(M,\mathbb{Z})\cong > \mathbb{Z}\alpha_{M}$ via the natural orientation and $p_{i}$ is the $i$-th projection of $E_{1}\times E_{2}$. This means that the intersection number $p_{1}^{*}(\alpha_{E_{1}})\cup \ > p_{2}^{*}(\alpha_{E_{2}})$ is 1, not divisible by $|G|=2$.
When I asked a similar question, some people pointed out that the correspondence $$ H^{2}(X,\mathbb{Z}) \ \longleftrightarrow H^{2}(M\times N,\mathbb{Z})^{G}, $$ does not hold in general; there is the Hochschild-Serre spectral sequence $$ E^{p,q}=H^{p}(G,H^{q}(E_{1}\times E_{2},\mathbb{Z}))\Rightarrow H^{p+q}(X,\mathbb{Z}) $$ Here $E^{0,2}$ term corresponds to $H^{2}(M\times N,\mathbb{Z})^{G}$ above.
Having said that, I still don't quite understand the intersection form on $X$ (mainly due to my poor understanding of the Spectral sequence). I would appreciate it if anyone could describe the intersection form. What if $\iota_{2}$ is replaced by $-id_{E_{2}}$?