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Commuting matrix variety $[A,B]=0$ - can one geometrically explain divisibility of $F_ q$ point count by high powers of $q$?

$\DeclareMathOperator\Comm{Comm}\DeclareMathOperator\Id{Id}$Consider the variety $\Comm$ of commuting matrices $[A,B]=0$ over some field $K$. It is much studied, and interesting for various reasons. ...
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