I don't know if the answer to this question is still of interest, but I can prove that for $c$ in a $1$-dimensional (open) subscheme of $\mathbb{A}^1$, the projective schemes $\mathrm{Proj}(R_{N,c})$ are isomorphic. Unfortunately, the proof I have recquires some advanced techniques. I will still post it, as someone may see some drastic simplifcations that can be made.
First consider the linear map $\mathbb{C}[X] \longrightarrow \mathbb{C}[X]$ defined by:
$$T_{\alpha} : M \longrightarrow T_{\alpha}(M) = M - \alpha \mathrm{Tr}(M).I_N.$$ It is a linear isomorphism provided $\alpha \neq \dfrac{1}{N}$. Furthermore, if one puts $M = T_{\alpha}(U)$, for $U = T_{\alpha}^{-1}(M)$, we have:
$$ M^2 - c\mathrm{Tr}(M).M = 0 \ \Leftrightarrow \ U^2 - (2 \alpha + c(1-\alpha.N))\mathrm{Tr}(U).U + \alpha(c(1-\alpha.N)+\alpha) \mathrm{Tr}(U)^2.I_N=0$$
In particular, for $\alpha = \frac{c}{cN-1}$, we have:
$$M^2 - c\mathrm{Tr}(M).M = 0 \ \Leftrightarrow U^2 - \frac{c}{c.N-1} \mathrm{Tr}(U).U = 0.$$
As $\alpha = \frac{c}{cN-1} \neq \dfrac{1}{N}$, the linear map $T_{\alpha}$ is an isomorphism and it maps isomorphically:
$$T_{\alpha} : R_{N,\frac{c}{cN-1}} \stackrel{\sim}\longrightarrow R_{N,c}.$$
For $\alpha = \frac{1-s}{2}$, this transformation is the one exhibited by @Ycor in the case $N=2$.
We define the map $\varphi : \mathbb{C} \backslash \{\frac{1}{N} \} \longrightarrow \mathbb{C}$ by :
$$\varphi(c) = \frac{c}{cN-1}$$
and we note that $\varphi \circ \varphi = \mathrm{id}$. The map $\varphi$ has exactly two fixed points : $0$ and $\frac{2}{N}$. If $c_0 \in \mathbb{C} \backslash \{0, \frac{2}{N} \}$, the sequence $(a_n = \varphi^{n}(c_0))_{n \geq 0}$ contains infintely many terms. The above argument then shows that the set:
$$\{c \in \mathbb{C}, \ \mathrm{Proj}(R_{N,c}) \simeq \mathrm{Proj}(R_{N,c_0}) \}$$ contains infinitely many points. I will now prove that this set is in fact a $1$-dimensional subscheme of $\mathbb{A}^1$. This is where I need some big guns, hopefully the argument may be simplified a lot.
Let $V \subset \mathrm{Proj}(\mathbb{C}[X]) \times \mathbb{C}$ the subscheme defined by the equation $X^2 - c\mathrm{Tr}(X)X = 0$ ($c$ is the name for the coordinate in the second factor) and let $p : V \longrightarrow \mathbb{C}$ the natural projection. By generic flatness, there exists a non-empty open subscheme $U \subset \mathbb{C}$, such that:
$$ p|_{p^{-1}(U)} : V_U = p^{-1}(U) \longrightarrow U$$ is flat. Note that $U$ is not equal to $\mathbb{C}$. Indeed $p^{-1}(0)$ is irreducible (but non-reduced!), while $p^{-1}(\frac{1}{N})$ contains (at least) two components of different dimension. We denote by $Z$ the complement of $U$ in $\mathbb{A}^1$, this is a closed (hence finite) subscheme of $\mathbb{C}$. As a consequence $U$ contains one of the $a_i$ defined above, say $a_{j_0}$.
We put $\mathcal{Q}$ be the Hilbert polynomial of $p^{-1}(a_{j_0}) = \mathrm{Proj}(R_{N,a_{j_0}}) \simeq \mathrm{Proj}(R_{N,c_0})$ and let $\mathcal{H}_{\mathcal{Q}}$ be the Hilbert scheme of subschemes of $\mathrm{Proj}(\mathbb{C}[X])$ having Hibert polynomial $\mathcal{Q}$. It is known that $\mathcal{H}_{\mathcal{Q}}$ is proper over $\mathbb{C}$, hence of finite type over $\mathbb{C}$.
The map $p : V_U \longrightarrow U$ being flat and the Hilbert polynomial of a fiber being $\mathcal{Q}$, the universal property of the Hibert scheme insures the existence of a map:
$$ f : U \longrightarrow \mathcal{H}_{\mathcal{Q}}$$
such that the pull-back by $f$ of the universal family over $\mathcal{H}_{\mathcal{Q}}$ is $V_U$.
Now we consider the action of $\mathrm{G} = \mathrm{PGL}(\mathbb{C}^{n^2})$ on $\mathcal{H}_{\mathcal{Q}}$ and we let $\mathrm{G}.f(a_{j_0})$ be the orbit of $f(a_{j_0})$ under $\mathrm{G}$ in $\mathcal{H}_{\mathcal{Q}}$. This is a locally-closed finite type subscheme of $\mathcal{H}_{\mathcal{Q}}$ over $\mathbb{C}$.
The scheme $\mathrm{G}.f(a_{j_0})$ parametrizes all the subschemes of $\mathrm{Proj}(\mathbb{C}[X])$ which are linearly isomorphic to $f(a_{j_0})$. Furthermore, the property of $f$ with respect to the universal family of $\mathcal{H}_{\mathcal{Q}}$ and the construction of the sequence $(a_n)$ imply the inclusion:
$$\{a_n, \ n \in \mathbb{N} \} \subset f^{-1}(\mathrm{G}.f(a_{j_0})).$$
As $\mathbb{A}^1$ is (obviously) affine and $\mathcal{H}_{\mathcal{Q}}$ is proper over $\mathbb{C}$, the scheme $f^{-1}(\mathrm{G}.f(a_{j_0}))$ is of finite type over $\mathbb{C}$. As a consequence $f^{-1}(\mathrm{G}.f(a_{j_0}))$ can not be zero-dimensional. Indeed, if it were, it would have infinitely many distincts connected components (the $\{a_n\}_{n \geq 0}$) and this is impossible for a scheme of finite-type over $\mathbb{C}$.
We deduce that $f^{-1}(\mathrm{G}.f(a_{j_0}))$ is positive dimensional in $\mathbb{A}^1$, and so it is Zariski dense. All fibers iof the form $p^{-1}(c)$, for $c \in f^{-1}(\mathrm{G}.f(a_{j_0})) \}$ are isomorphic, because $f^* W = V_U$ and all $W_{y}$, for $y \in \mathrm{G}.f(a_{j_0})\}$ are isomorphic, where:
$$W \longrightarrow \mathcal{H}_{\mathcal{Q}}$$
is the universal family.
End of the proof.
(Minor) comment : it rather frustrating, but I can't prove that $0$ is the open subset where the $R_{N,c}$ are isomorphic to each other.