@Carlo's answer is very insightful from a physics perspective, thanks a lot for the teaching and learning here. My answer is from a more ML and statistic perspective as @Ed Smith asked.
But in the OP, I think the formulation is not accurate, your spatial and temporal
covariance matrices do not have to share the same set of singular values, noticing that the $B_{st} = \sum_{i} x_i(s)x_i(t)$ involves also spatial indices $s$ while $A_{ij}$ depends only on temporal indices $t$.
Shared eigenvalues and shared eigenvectors/eigenspaces are not the same, the latter is a much stronger feature in general.
(1) Shared eigenvalues
As pointed out by @Carlo, "when the empirical spatial and temporal covariance matrices share the same positive eigenvalues, then you know that your data is self-averaging in both space and time." In addition, if shared singular values are detected, the joint inference of spatial temporal series might be possible (known as "Spatial-Temporal Spectrum Sensing" [Do et.al.], where a Fourier basis is used). Another important pattern is that, since your eigenvalues are the same, so would the ordering of eigenvalues. This additional factor may be useful in detecting change-point via SVD when evolutionary dynamics exists [Townsend&Gong]. However, due to numerical issues for large matrices or outliers in observations, sometimes positive eigenvalues (since we are concerning covariance matrices) may be very close to zero; then shared eigenvalues to correct numerical or detect outliers.
(2) Shared eigenspaces A more important feature may be the eigenspaces spatial and temporal covariance spans, since the eigenvectors represent the spatial and the temporal modes [Greenewald&Hero], shared eigenspaces may allow borrowing information from spatial data to estimate temporal parameters and vice versa. Besides, we may find a good basis spanned by eigenvectors (or chosen spectrum basis) that approximates both spatial and temporal dependence well. This is consistent with Carlo's answer above.
If there are shared eigenvectors for both matrices, another natural thought would be to construct effective approximations when the model is fitted to large datasets like spatial datasets [Genton]. Effective approximations of certain models like Gaussian processes and Gaussian random fields are of central important in machine learning and spatial statistics [Bauer et.al.], especially for the scenarios that require efficient fits to large datasets. When you use approximation techniques for SVD in large spatial-temporal matrices, shared spatial-temporal spectra may allow a better approximation [Bogaardt et.al.]. It also allows fine filtering in image processing (other than signal processing).
Reference
(by date, not necessarily past 7 years.)
[Genton] Separable approximations of space-time covariance matrices, 2007.
[Do et.al.] Joint Spatial-Temporal Spectrum Sensing for Cognitive Radio Networks, 2010.
[Greenewald&Hero]Robust Kronecker Product PCA for Spatio-Temporal Covariance Estimation, 2015.
[Bauer et.al.]Understanding Probabilistic Sparse Gaussian Process Approximations, 2016.
[Baranger et.al.] Adaptive Spatiotemporal SVD Clutter Filtering for Ultrafast Doppler Imaging Using Similarity of Spatial Singular Vectors, 2018.
[Townsend&Gong] Detection and analysis of spatiotemporal patterns in brain activity, 2018.
[Bogaardt et.al.] Dataset Reduction Techniques to Speed Up SVD Analyses on Big Geo-Datasets, 2019.