$\DeclareMathOperator\At{At}\DeclareMathOperator\Obj{Obj}\DeclareMathOperator\Mor{Mor}$According to https://ncatlab.org/nlab/show/Atiyah+Lie+groupoid#idea the Atiyah Lie groupoid $\At(P)$ of a principal $G$ bundle $\pi:P \rightarrow X$ is a category such thatfor which $\Obj(\At(P))=\lbrace \pi^{-1}(x): x \in X \rbrace$$$\Obj(\At(P))=\lbrace \pi^{-1}(x): x \in X \rbrace$$ and $\Mor(\At(P))=\lbrace f:\pi^{-1}(x)\rightarrow \pi^{-1}(y): \text{$f$ is a $G$ equivariant morphism}\rbrace$.$$\Mor(\At(P))=\big\lbrace f:\pi^{-1}(x)\rightarrow \pi^{-1}(y): \text{$f$ is a $G$ equivariant morphism}\big\rbrace.$$ Structure maps of this category are easy to guess. Now it is easy to see that $\At(P)$ is indeed a groupoid.
Although it is mentioned in https://ncatlab.org/nlab/show/Atiyah+Lie+groupoid#idea that the Atiyah Lie groupoid is indeed a Lie groupoid, I am not able to guess appropriate smooth structures on $\Obj(\At(P))$ and $\Mor(\At(P))$ such that the source and the target maps are surjective submersions and other structure maps are smooth.
Is there any natural choice of such smooth structures on both $\Obj(\At(P))$ and $\Mor(\At(P))$ such that $At(P)$ is a Lie groupoid so that if someone talks about the Atiyah Lie groupoid of a principal $G$ bundle then he/she is precisely assuming those natural choice of smooth structures on $\Obj(\At(P))$ and $\Mor(\At(P))$?
I would also be very grateful if someone point me to any literature in this direction.