$\DeclareMathOperator\PGL{PGL}\DeclareMathOperator\GL{GL}$It seems that J. Kollár gave some examples in his paper "Non-quasi-projective moduli spaces".
In pg. 1080, I think that there is an example of a proper free action of $\PGL(3)$ on a smooth quasi-projective variety $U$ such that the quotient $U/{\PGL(3)}$ is not a scheme. To be precise, $U$ is an open subscheme of the (projectivized) linear series of curves $\lvert\mathcal{O}_{\mathbb{P}^2}(d)\rvert$ and $\PGL(3)$ acts as automorphisms of $\mathbb{P}^2$. We have that $U$ is the open subset parametrizing curves $C$ such that:
(1) $C$ is integral, and the geometric genus of the normalization is $> \frac{1}{2}\binom{d-1}{2}$. (In the paper it says smooth irreducible instead of integral, but I think that this might be a typo?)
(2) The stabilizer $C$ under the action of $\PGL(3)$ is trivial.
Then it is show that the action on $U$ is free and proper (for properness of the action one may use Stacks Lemma 32.16.2, which works for algebraic spaces with quasicompact separated diagonal, to assume that the generic fiber of the family over the DVR is smooth, as he does in his Claim 4). Kollár shows that for $d$ large, the quotient is a smooth algebraic space which is not a scheme.
I believe that the same would hold for the action of $GL(3)$ on the corresponding open subset $\tilde{U}$ of the affine (non-projectivized) space $H^0(\mathbb{P}^2, \mathcal{O}_{\mathbb{P}^2}(d))$. Then the corresponding étale $\GL(3)$-torsor on the quotient $\tilde{U}/{\GL(3)}$ should not be Zariski locally trivializable.