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Try "Measure, integral and probability", too. It doesn't cover all the topics you mentioned, but you should be able to work through it quite quickly, and it will establish a good base to build on.
Jacod and Protter's book is a reasonably friendly introduction, and doesn't require any background beyond multivariable calculus. As camomille said, you're looking at a couple of months of work to take all this stuff on board.
None of the references were as systematic as I would have liked, but I largely stopped pursuing this line of inquiry when you pointed out that the laws of the integrated processes are still singular.
Thanks for your answer Tom. I don't have much intuition about Banach spaces and their duals. Is that a restrictive assumption? Can one always find such a measure $\mathbb{P}$?
Perhaps "in most textbooks" was a little strong. Some books do start with a non-negative definite matrix $\Sigma$ and then specify the density function. I expect this construction is much more common in applied maths. I've checked two textbooks I had to hand - one engineering text and one on machine learning. They both construct the mutlivariate normal in this way.
Thanks for your comment. The construction in Nualart that you mentioned is for a set of one-dimensional Gaussians indexed by a Hilbert space. I'm really looking for analogues of the normal distribution that take values in a space $S$.
Partha Niyogi wrote a number of papers about using the graph laplacian of a data set for learning purposes. In the limit of infinite data living on a manifold, this converges to the Laplace-Beltrami operator.