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Thanks! This looks very much like what I was looking for. I also didn't know about Deligne's appendix to Residues and Duality that the work references.
The reference is the same two chapters of EGA (see I.10.11 in particular). I think the definitions there are equivalent to saying that a sheaf is a sheaf of topological modules which is $I$-adically complete and has locally a fundamental collection of neighborhoods of zero consisting of submodules. A sheaf is coherent (again in my re-interpretation) if it is locally a quotient of a finitely-generated free module by an open submodule.
You don't need to be careful about punctures unless you care about complex-analytical type data at the punctures. But (perhaps this is nitpicking), you do need to be careful about "instability". When $C$ is anything but a sphere with no punctures, the character variety parametrizes based maps $C\to BG$, i.e. principal $G$-bundles with chosen trivialization at the base point. (For $GL_n$, this is equivalent to vector bundles: in general, there is a standard dictionary, see en.wikipedia.org/wiki/Frame_bundle). When $C$ has $\pi_2 \neq 0$ with $G$ not discrete, the two may not be the same
You don't need quasi-projectiveness. Being of finite type is enough: given any (irreducible) finite-type $X$ with $G$ action, let $Y\subset X$ be a closed divisor such that the complement $X\setminus Y$ is affine. Then the complement $X\setminus G\cdot Y$ is an affine scheme, and Sean's answer applies.
Right. (I removed my earlier comment about algebraicity and edited the answer instead). Re your second question, if I remember correctly, the category of extensions of an algebraically closed field $k$ of transcendence degree 1 is equivalent to the category of closed curves with finite morphisms, and you can use that there are no nonconstant morphisms from $\mathbb{P}^1$ to a curve of higher genus.