Call a type of structure rigid if any automorphism of such a structure is an identity. (This is a bit different from some other uses of the word, but hopefully I'll be forgiven.) For example, well-orderings are rigid. It follows that assuming the axiom of choice, there is a rigid type of structure (namely, a well-ordering) such that any set can be equipped with that type of structure (in a non-unique way, of course).
Now the axiom of choice isn't necessary for that conclusion. Extensional well-founded relations are also rigid, and the axiom of foundation implies that any set injects into an extensional well-founded relation (its transitive closure). Aczel's axiom of anti-foundation also suffices, since strongly extensional relations are also rigid, and anti-foundation implies that any set injects into such a relation. But with neither foundation nor anti-foundation, the membership relation $\in$ needn't be rigid. For instance, the set {a,b}, where a={a} and b={b} are unequal ill-founded sets with the same membership tree, has a nonidentity $\in$-automorphism which swaps a and b.
Now my question: If we don't assume choice or any sort of foundation, does there still exist a rigid type of structure with the property that any set can be equipped with that type of structure?