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Let $R$ be the ring $\mathbb{C}[a,b,c,d]/(ac-b^2,bd-c^2,ad-bc)$. Let $I$ be the ideal of $R$ generated by $a,d$. Let $X=\operatorname{Spec}(R)$ and $\tilde{X}$ be the blow-up of the affine scheme $X$ ...