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3 votes
1 answer
260 views

Better alternative to solve quadratic programming for large matrices

I have the following problem. Let's say we have $x_{jk}$ it is an expression value of gene $j$ in a sample $k$. It is the average of expression levels across the cell types $s_{ij}$, weighted by ...
2 votes
0 answers
71 views

Select n vectors from k vectors (in 3D) such that each component of the resultant vector >= each component of a given vector M

this was left unanswered for 1 week on MStackExchange, so I thought MOverflow would be more appropriate. Thanks :) Let $R = (R_x, R_y, R_z)$ be the resultant vector of the n vectors and $M = (M_x, ...
3 votes
2 answers
2k views

ILP for minimum edge coloring problem

We know that for a graph $G=(V,E)$, minimum edge coloring is a coloring of $E$, i.e., a partition of $E$ into disjoint sets $E_1, E_2, \dots, E_k$ such that, for $1 \leq i \leq k$, no two edges in $...
3 votes
0 answers
970 views

Testing if a point is inside a convex polytope formed by halfspaces in n-dimension

Assume we have a convex polytope that is formed by the intersection of $k$-halfspaces in $\mathbb{R}^{n}$. $$ a_{0,0}x^{n-1} + {a}_{0,1}x^{n-2} + ... a_{0,n-1} \leq 0 $$ $$ a_{1,0}x^{n-1} + {a}_{1,...
0 votes
1 answer
82 views

Introducton books for ‎$\frak{E}_p(I)$

Are there any good books different from abstract harmonic analysis by hewitt to study ‎$\frak{E}_p(I)$. where ‎$\frak{E}_p(I)$ is: ‎Let $I$ be an arbitrary index set‎. ‎For each $i\in I$ let $H_i$ ...
1 vote
1 answer
219 views

approximate diameter of polytopes in high dimensions

I just came across the following problem: Let us consider the unit corner of the n-cube $$ \Delta^n = \left\{(t_1,\cdots,t_n)\in\mathbb{R}^n\mid\sum_{i = 1}^{n}{t_i} \leq 1 \mbox{ and } t_i \ge 0 \...
1 vote
2 answers
1k views

Are there some algorithms to solve the diagonal matrix $X$ to the following matrix equation?

Suppose $X$ is an unknown $m \times m$ diagonal matrix. Given a scalar $0<c<1$, and a matrix $A$ of $m \times m$ size whose entries $0<A_{i,j}<1$. Are there some algorithms to find the ...
2 votes
0 answers
154 views

Listing all Lattice Points in a Box

Let $B := [-1,1]^n$ be an $n$-dimensional box. Moreover, let $v_1,\ldots,v_n \in \mathbb{R}^n$ form a basis of $\mathbb{R}^n$, where the entries of the $v_i$ are explicitly irrational. We can assume ...
3 votes
2 answers
792 views

Has anyone developed a technique to generate a polytope given (possibly redundant) inequality constraints? [closed]

I've found a few papers that deal with removing redundant inequality constraints for linear programs, but I'm just trying to find the vertices for a feasible region, given a set of inequality ...
1 vote
0 answers
171 views

Finding all feasible solutions

Let $u$ be a $n_{max} \times m$ matrix. Let $z$ be a $n_{max} \times s_{max} \times n_{max}$ cube. Let $w$ be a $n_{max} \times 1$ vector. All the three matrices can have values from the set $\{ 0, 1\}...
2 votes
0 answers
210 views

Finding optimal linear transformation for intersection of convex polytopes

I previously posted this on MathSE and am now trying here. I have the following situation, as shown in the following diagram: $W=\{w_i\}_{i=1..|W|}$ is a set of vertices (show in diagram in blue) ...
1 vote
0 answers
120 views

The column generation technique on a Train Unit Assignment Problem [Linear Programming]

I am doing an assignment where I need to implement a mathematical model that I can't wrap my head around. For the technique of column generation, one would need to my understanding, a master problem ...
3 votes
1 answer
340 views

Name search for special Linear Integer Program

I am looking for a name for the following question in literature! (and if you know it, then it would be great) I couldn't find it and due to wide audience here, presumably you know more. Thank you $...
6 votes
3 answers
148 views

Algorithm to quickly compute the individual inverses of a linear sequence of matrices

Fix $n \times n$ real symmetric positive definite matrices $A$ and $B$. Fix vectors $x$ and $y$ in $\mathbf{R}^n$. I want to compute the following bilinear products quickly: $\{x^T (A+mB)^{-1} y\}_{m=...
4 votes
1 answer
3k views

Find the minimum distance between two convex hulls

We work over $\mathbb{R}^N$. Let $\mathbf{P}_1$ denote the hyperplane constructed using $N$ points, each of which is on a different axis (there are $N$ axes). We denote by $\mathbf{P}_2$ the convex ...
4 votes
1 answer
891 views

Basic result in semi-infinite linear programming

Consider a standard linear program of the form $$\textrm{minimize}_x~~~~ c^Tx~~~~ s.t. \\ Ax = b \\ x \geq 0$$ with $x\in \mathbb{R}^n$ and $A \in \mathbb{R}^{m \times n}$. It is well known that, if ...
2 votes
1 answer
186 views

How can I find the maximum value of this function?

For given values of $A \in \mathbb{R}^{m \times n}, b \in \mathbb{R}^m$, how can I find the value of: $$ \max_{x \in [0,1]^n} \|Ax+b \|_1 $$ Or is this problem NP-hard?
4 votes
0 answers
233 views

Determining Nullspace Basis such that only one column is deleted or added as row is added or deleted, and remaining columns of basis stay the same

I would like to compute, in MATLAB, the basis Z for the nullspace of an m by n matrix A, such that if one row of A is added (resulting in A_a), the basis for A_a is n-m-1 of the n-m columns of Z, i.e.,...
3 votes
1 answer
204 views

Numerical solution of singular ODE

Consider the singular ODE $y''+\frac{y'}{r}+p(r)y=0 \ \ with \ \ y(0)=1 \ \ and \ \ y'(0)=0$. Theoretically such solution exists and is unique if $p$ is nice. Is there a method to numerically ...
10 votes
3 answers
6k views

Solving a system of linear inequalities -- what is the dimension of the solution set?

It is well known how to solve a system of linear equations $A{\bf x} = {\bf b}$, but how do we solve a system of linear inequalities $A{\bf x} \leq {\bf b}$? For the applications I have in mind the ...
2 votes
1 answer
229 views

Algorithm to find the vertices of the equidistant lines between N closed polygonal lines

I have a set $\{C_1, C_2, \ldots, C_N\}$ of $N$ nonintersecting closed piecewise linear curves on the Euclidean plane. For every point $x \in \mathbb{R}^2$ we say it belongs to a territory serviced by ...
1 vote
0 answers
85 views

Smallest sum of original column entries in 2d matrix [closed]

I have an interesting optimization problem I am trying to solve now and I thought I'd share it here in order to find the best answer. The problem itself is not complicated and it is stated like this: ...
4 votes
1 answer
585 views

How to implement linear constraints that include several absolute values

Dear all, I am trying to implement a linear constraint that includes several absolute values in the form: Abs(A) + Abs(B) + Abs(C) + Abs(D) + ... = 1 Since the minimization problem includes quite a ...
1 vote
1 answer
2k views

Computation of extreme rays of rational polyhedral cones - Hemmecke's project and lift algorithm

I am working on an implementation of Raymond Hemmecke's algorithm for finding generating sets of cones: http://arxiv.org/abs/math/0203105 Unfortunately I am struggling to make the algorithm work on ...
3 votes
1 answer
1k views

Constrained vs Unconstrained Optimization

I'm currently working on an optimization problem with a linear objective with linear and nonlinear constraints, i'm facing difficulties reaching a good solution, so i was advised to move the nonlinear ...
0 votes
0 answers
614 views

Hadamard / matrix product adjoint

First of all I would like to thank everyone over here at mathoverflow for their amazing generosity and help (for both pros and newbies like myself). I apologize if this question seems dumb; I'm a new ...
1 vote
1 answer
207 views

Computing probability that $Ax\geq0$ where $x$ is a vector of iid gaussians and $A$ is matrix of $1$s and $0$s

This question came up in my research: What is the probability that $Ax\geq0$ where $x$ is a vector of iid gaussians and $A$ is matrix of $1$s and $0$s? So far I only figured out that I can do Monte ...
6 votes
0 answers
97 views

Finding the optimal mixture of two convex functions

I am trying to find an efficient way to solve the problem $$\min_{p,x_1,x_2} p\cdot f(x_1)+ (1-p) \cdot f(x_2)~~~~~ s.t.\\p\cdot g_1(x_1) + (1-p)\cdot g_2(x_2)\leq 1 \\ 0\leq p \leq 1$$ where $x_1,x_2\...
3 votes
2 answers
216 views

What are interesting heuristics of determining how far given matrix is from a singular one?

The condition number and volume of matrix (defined as absolute value of its determinant) are things which come to mind. Is there more? I think that over the years numerical folks (who are faced with ...
2 votes
0 answers
148 views

Derivation of gradient of SSE in Geodesic Regression

On page 79 (or page 5) of this this paper the gradient of the SSE of the Geodesic model is described explicitly. My question is how are these equitations derived in detail; where can I find the ...
1 vote
0 answers
101 views

How to fit a stochastic matrix to given data.?

Given a data sequence of noisy observations of a 3-state Markov chain $X$ -- $y_1$,$y_2$,...$y_n$, with two transition matrices $A_1$ and $A_2$ corresponding to different regions (**) in the (unit) ...
3 votes
0 answers
61 views

Quasi-M matrices?

Does any body know a reference on lower triangular matrices with negative entries everywhere except for the diagonal and subdiagonal where entries are positive (when all entries are negative with ...
2 votes
0 answers
149 views

How to solve the following generalized quadratic programming problem [closed]

I want to solve a generalized form of a quadratic programming problem $$\min_x \left(\sqrt{x^TPx}+\sqrt{x^TQx}\right)^2+c^Tx$$, $$\textrm{ s.t. } Ax\le b.$$ Here, $P$ and $Q$ are both positive ...
2 votes
1 answer
426 views

Network flows with shared capacities

Suppose we have a flow network, with capacity constraints on weighted sums of arc flows, such as: $$2 f(1, 2) + 3 f(4, 5) + f(3, 7) \leq 10,$$ where $f(1, 2)$ denotes the flow through arc $(1, 2)$....
6 votes
1 answer
1k views

Speed up Linear programming

I have a linear programming problem like this: minimize $c^t X$ under the constraint that $AX \ge b$. I will need to solve this linear programming problem online many times. I need it to be as fast ...
5 votes
0 answers
167 views

A specific case of the $p$-center problem

Given a fixed positive integer $m$, let $\cal{S}$ be the subset from $\mathbb{R}^m$ defined as $\cal{S} = \{u \in \mathbb{R}^m \mid \forall i \in \{1, \dots, m\}, u(i) > 0$ and $\sum_{i=1}^m{u(i) = ...
0 votes
0 answers
83 views

Bits of precision matrix reconstruction

We have a real rank $r$ matrix $M\in\{0,1\}^{n\times n}$. Suppose we have diagonalized using $LMR=D$. I want to recover a real matrix $\widetilde{M}$ such that maximum absolute entry of $\widetilde{...
2 votes
1 answer
130 views

Fastest 'Oracle' Algorithm for satisfying a single linear constraint on a convex set?

In this paper by Arora, Hazan, and Kale (http://www.cs.princeton.edu/~arora/pubs/MWsurvey.pdf) a method is given for using the Multiplicative Weights Update algorithm to quickly solve Linear Programs ...
0 votes
0 answers
161 views

Way to parameterise sparse multi diagonal matrix

I have an NxN matrix S that looks like this: $$ S^{-1} = K^{-1} + \Lambda $$ where N is a multiple of 3, both K and S are positive definite matrices, and Lambda is $$ \Lambda = \begin{bmatrix} x &...
5 votes
1 answer
384 views

Examples of Polyhedra with Large Shadows

Let $P \subseteq \mathbb{R}^n$ be a polyhedron described by $\mathcal{O}(n^{c_1})$ inequalities, where $c_1$ is a constant. Moreover, let $M\colon P \to \mathbb{R}^2$ be a linear mapping. I'm looking ...
1 vote
1 answer
175 views

accelerate convex optimization by proximal projection

I am using level method to solve non-smooth convex programming problem (where the objective function is given by an oracle from another program ): http://www2.isye.gatech.edu/~nemirovs/Lect_EMCO.pdf ...
2 votes
2 answers
606 views

Solving a matrix equation $X=c \cdot AXA' +I$ with a diagonal corrections

I am now struggling to solve the matrix $X \in R^{n \times n}$ in the following equation: $X=c \cdot AXA' - diag(c \cdot AXA')+ I$, where (1) $A \in R^{n \times n}$ is a given matrix whose element ...
1 vote
1 answer
117 views

QR decomposition of matrix [closed]

I have matrix $M = \begin{pmatrix} A & B \\ B^T & 0\end{pmatrix}$, where $A$ is $N\times N$, $B$ is $N\times 2$ and I have $Q$, $R$ such that $A = QR$. What is the fastest way to find $Q'$ and ...
6 votes
3 answers
11k views

Maximum flow with negative capacities?

I'm trying to compute an (s-t) maximum flow through a network which includes a number of arc pairs ((u,v), (v,u)) that have equal, negative capacities (weights). I'm not aware of any efficient ...
1 vote
1 answer
4k views

Maximizing linear objective function with absolute values

This has be asked on other forums, though couldn't find authoritative answer. I have a linear program over the reals and don't want to introduce integer or binary variables. The objective function ...
0 votes
1 answer
2k views

eigen-decomposition solution? is it unique?

Assume an N*N covariance matrix (Q) which is a positive definite matrix. The decoder X is assumed to be N*s, where s<=N. X is calculated to be s eigenvectors corresponding to s minimum eigenvalues. ...
5 votes
1 answer
2k views

Algorithm to minimally connect line segments in Euclidean plane

Suppose you have finitely many line segments in the Euclidean plane. How do you "connect them to form one chain of line segments of minimal length?" More formally and generally, what I'm looking for ...
7 votes
1 answer
224 views

A polytope with a bound on the sum of any $k$ variables

Let $2\le k\le n-1$ and define the polytope $$P_k(n) = \lbrace (x_1,\ldots,x_n) \in \mathbb{R}^n : -1\le x_{i_1}+\cdots +x_{i_k} \le 1 \text{ for all } 1\le i_1\lt\cdots\lt i_k\le n\rbrace.$$ There ...
2 votes
1 answer
276 views

An optimization problem in complex space

Consider the following optimization problem $$ \min \| \textbf{Ax-B}\| $$ $$ s.t.|x_i|=1,i=1,...,n $$ where $\textbf{x}\in \mathbb{C}^{n}$ is the optimization varaible, $x_i$ is the $i$-th ...
2 votes
1 answer
104 views

Standard names and methods for this type of fitting minimization

In material science research, we have come across the following type of problem. Given a m by n matrix A, a m vector b, and error tolerance $\varepsilon$, we want to do this minimization $$\eqalign{ ...

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