What's a prime congruence?
The lattice of ideals of a commutative ring has three well-studied operations:
- Sum: $I+J$
- Intersection: $I\cap J$
- Product: $I\cdot J$.
Primeness is defined with the third operation: $P$ is prime
if $I\cdot J\subseteq P$ implies $I\subseteq P$ or $J\subseteq P$.
For general algebraic structures, we have three corresponding
operations on congruences:
- Join: $\alpha\vee \beta$
- Meet or Intersection: $\alpha\wedge \beta = \alpha\cap \beta$
- Commutator: $[\alpha,\beta]$.
General primeness is defined in terms of the commutator operation:
congruence $\pi$ is prime
if $[\alpha,\beta]\subseteq \pi$ implies $\alpha\subseteq \pi$ or
$\beta\subseteq \pi$.
You can find this definition (for congruence modular varieties) on page 64 of
Freese, Ralph; McKenzie, Ralph,
Commutator theory for congruence modular varieties.
London Mathematical Society Lecture Note Series, 125. Cambridge University Press, Cambridge, 1987.
Remark: for noncommutative rings, $[I,J] = IJ+JI$.
For groups or Lie algebras, $[I,J]$ is the usual commutator of
normal subgroups or Lie ideals.
Since you are thinking about the spectrum, let me point you to
a couple of papers:
Agliano, Paolo,
The prime spectrum of a universal algebra.
Riv. Mat. Pura Appl. No. 5 (1989), 97-105.
Georgescu, George; Mureşan, Claudia,
Going up and lying over in congruence-modular algebras.
Math. Slovaca 69 (2019), no. 2, 275-296.