Pullback-stability is sometimes considered for individual colimits, or at least, smaller classes than “all colimits of shape $D$”. However, it’s most often used in settings where it holds for large classes of colimits, so authors usually define it just at the level of generality they need. In particular, the nlab article you link seems to be based in large part on Lurie’s treatment in Higher Topos Theory, §6.1.1.1; there, Lurie’s motivation is presenting the Giraud conditions for $\infty$-toposes, so he defines pullback-stability of colimits in the form and generality he wants for that.
One place where it’s used for smaller classes of colimits is in the study of adhesive categories, as studied in e.g. Garner, Lack, On the axioms for adhesive and quasi-adhesive categories, 2011, particularly in the condition “pushouts along monomorphisms exist, and are stable under pullback”. But, as discussed in that paper, adhesive categories satisfy rather more: such pushouts are van Kampen. And this I think is the other reason why pullback-stability isn’t often considered for individual colimits: in the most-studied settings that have only some colimits pullback-stable, one wants not just stability, but the stronger condition of van Kampen-ness. And the nlab page for van Kampen colimits does define it for individual colimits, and notes that one half of that definition can be seen as a definition of pullback-stability:
The condition (1) ⇒ (2) is precisely the statement that the colimit of $G$ is universal, i.e. preserved by pullback.
Many sources, e.g. the above paper of Garner and Lack, talk about pullback-stability of colimits without explicitly defining it. This I think is because it’s essentially always considered in settings where enough pullbacks exist that they can be viewed as pullback functors between slices $f^* : \mathcal{C}/X \to \mathcal{C}/Y$; so preservation of colimits under pullback is viewed just as a special case of preservation by a functor (this is explicit in e.g. Lurie’s Def. 6.1.1.2) — which is defined for individual colimits in many standard references. And this again comes out equivalent to the “universality” implication in the definition of van Kampen, and to your proposed definition in the question.