I quote (page 753) from:
Cooper, D., Long, D. D., Representation theory and the A-polynomial of a knot., Knot theory and its applications. Chaos Solitons Fractals 9 (1998), no. 4-5, 749-763.
"It is known that the $A$-polynomial is not a complete invariant of knots: it is shown in [10], that there are different knots with the same A-polynomial."
Here is the reference [10]:
Cooper, D., Long, D. D., Remarks on the A-polynomial of a knot., J. Knot Theory Ramifications 5 (1996), no. 5, 609-628.
Remark: According to the MathSciNet review of the above paper ([10]): "It is not known whether the $A$-polynomial ever distinguishes mutant knots." But that was in 1996 and I do not know the state of the art.
Remark: Marc Culler has made available a census of $A$-polynomials here. Presumably you can use this census to find many examples if you download the tarball and run a script to compare them.
Remark: It might be useful to use the algorithm Ashley, Burelle and I wrote in Rank 1 character varieties of finitely presented groups to do these computations (note the algorithm is implemented in SnapPy).
Remark: You can find the above papers by Cooper & Long here: https://web.math.ucsb.edu/~cooper/Publications.html