I believe there are closed form representations of the form:
$$\mu_1(k,\sigma)=2^{-\sigma}\,\sum\limits_{j=0}^{2 k}b_{k,j}\,\zeta^{(j)}(\sigma)$$
$$\mu_2(k,\sigma)=2^{-\sigma}\,\sum_{j=0}^{2 k+1}c_{k,j}\,\zeta^{(j)}(\sigma)$$
where the sums are over $\zeta(\sigma)$ and it's derivatives so it doesn't look very promising with respect to finding an efficient way to calculate these for large values of $k$.
Mathematica gives the following closed form representations of $\mu_1(k,\sigma)=\sum\limits_{m=1}^\infty\frac{(-1)^{m+1}\log^{2 k}(m)}{m^{\sigma}}$ for the first few values of $k$ and the result $\mu_1(1,0.8)=-0.0668616$.
$\begin{array}{cc}
\text{k} & \text{$\mu_1(k,\sigma $)} \\
0 & 2^{-\sigma } \left(2^{\sigma }-2\right) \zeta (\sigma ) \\
1 & 2^{-\sigma } \left(\log (16) \zeta '(\sigma )+\left(2^{\sigma }-2\right) \zeta ''(\sigma )-2 \log ^2(2) \zeta (\sigma )\right) \\
2 & 2^{-\sigma } \left(4 \log (2) \left(\log (2) \log (4) \zeta '(\sigma )-\log (8) \zeta ''(\sigma )+2 \zeta ^{(3)}(\sigma )\right)+\left(2^{\sigma }-2\right) \zeta ^{(4)}(\sigma )-2 \log ^4(2) \zeta (\sigma )\right) \\
3 & 2^{-\sigma } \left(12 \log ^5(2) \zeta '(\sigma )-30 \log ^4(2) \zeta ''(\sigma )+\left(2^{\sigma }-2\right) \zeta ^{(6)}(\sigma )+\log (4) \left(6 \zeta ^{(5)}(\sigma )+5 \log (2) \left(\log (16) \zeta ^{(3)}(\sigma )-3 \zeta ^{(4)}(\sigma )\right)\right)-2 \log ^6(2) \zeta (\sigma )\right) \\
4 & 2^{-\sigma } \left(2 \log (4) \left(4 \log ^6(2) \zeta '(\sigma )-7 \log (2) \left(\log ^2(2) \left(\log (2) \log (4) \zeta ''(\sigma )+5 \zeta ^{(4)}(\sigma )-2 \log (4) \zeta ^{(3)}(\sigma )\right)+2 \zeta ^{(6)}(\sigma )-\log (16) \zeta ^{(5)}(\sigma )\right)+4 \zeta ^{(7)}(\sigma )\right)+\left(2^{\sigma }-2\right) \zeta ^{(8)}(\sigma )-2 \log ^8(2) \zeta (\sigma )\right) \\
5 & 2^{-\sigma } \left(20 \log ^9(2) \zeta '(\sigma )-90 \log ^8(2) \zeta ''(\sigma )+\left(2^{\sigma }-2\right) \zeta ^{(10)}(\sigma )+6 \log ^2(2) \left(\log (4) \left(20 \zeta ^{(7)}(\sigma )+\log (2) \left(\log (2) \left(42 \zeta ^{(5)}(\sigma )+5 \log (2) \left(\log (16) \zeta ^{(3)}(\sigma )-7 \zeta ^{(4)}(\sigma )\right)\right)-35 \zeta ^{(6)}(\sigma )\right)\right)-15 \zeta ^{(8)}(\sigma )\right)+20 \log (2) \zeta ^{(9)}(\sigma )-2 \log ^{10}(2) \zeta (\sigma )\right) \\
\end{array}$
Mathematica gives the following closed form representations of $\mu_2(k,\sigma)=\sum\limits_{m=1}^\infty\frac{(-1)^{m+1}\log^{2 k+1}(m)}{m^{\sigma}}$ for the first few values of $k$.
$\begin{array}{cc}
\text{k} & \text{$\mu_2(k,\sigma $)} \\
0 & 2^{-\sigma } \left(-\left(2^{\sigma }-2\right) \zeta '(\sigma )-\log (4) \zeta (\sigma )\right) \\
1 & -2^{-\sigma } \left(-6 \log ^2(2) \zeta '(\sigma )+\log (64) \zeta ''(\sigma )+\left(2^{\sigma }-2\right) \zeta ^{(3)}(\sigma )+2 \log ^3(2) \zeta (\sigma )\right) \\
2 & 2^{-\sigma } \left(10 \log (2) \left(\log ^3(2) \zeta '(\sigma )-2 \log ^2(2) \zeta ''(\sigma )-\zeta ^{(4)}(\sigma )+\log (4) \zeta ^{(3)}(\sigma )\right)-\left(2^{\sigma }-2\right) \zeta ^{(5)}(\sigma )-2 \log ^5(2) \zeta (\sigma )\right) \\
3 & 2^{-\sigma } \left(14 \log ^6(2) \zeta '(\sigma )-14 \log (2) \left(3 \log ^4(2) \zeta ''(\sigma )+\zeta ^{(6)}(\sigma )+5 \log ^2(2) \left(\zeta ^{(4)}(\sigma )-\log (2) \zeta ^{(3)}(\sigma )\right)-\log (8) \zeta ^{(5)}(\sigma )\right)-\left(2^{\sigma }-2\right) \zeta ^{(7)}(\sigma )-2 \log ^7(2) \zeta (\sigma )\right) \\
4 & 2^{-\sigma } \left(6 \log (2) \left(3 \log ^7(2) \zeta '(\sigma )+\log (4) \left(-6 \log ^5(2) \zeta ''(\sigma )+6 \zeta ^{(7)}(\sigma )+7 \log (2) \left(-2 \zeta ^{(6)}(\sigma )+\log ^2(2) \left(\log (4) \zeta ^{(3)}(\sigma )-3 \zeta ^{(4)}(\sigma )\right)+\log (8) \zeta ^{(5)}(\sigma )\right)\right)-3 \zeta ^{(8)}(\sigma )\right)-\left(2^{\sigma }-2\right) \zeta ^{(9)}(\sigma )-2 \log ^9(2) \zeta (\sigma )\right) \\
5 & 2^{-\sigma } \left(22 \log ^{10}(2) \zeta '(\sigma )-22 \log (2) \left(5 \log ^8(2) \zeta ''(\sigma )+\zeta ^{(10)}(\sigma )+\log (2) \left(\log (8) \left(5 \zeta ^{(8)}(\sigma )-5 \log ^5(2) \zeta ^{(3)}(\sigma )+\log (4) \left(-5 \zeta ^{(7)}(\sigma )+5 \log ^3(2) \zeta ^{(4)}(\sigma )+7 \log (2) \left(\zeta ^{(6)}(\sigma )-\log (2) \zeta ^{(5)}(\sigma )\right)\right)\right)-5 \zeta ^{(9)}(\sigma )\right)\right)-\left(2^{\sigma }-2\right) \zeta ^{(11)}(\sigma )-2 \log ^{11}(2) \zeta (\sigma )\right) \\
\end{array}$
I believe the results above can be stated more concisely as follows:
$$\mu_1(k,\sigma)=\frac{\partial^{2 k}\,\eta(\sigma)}{\partial\sigma^{2 k}}$$
$$\mu_2(k,\sigma)=-\frac{\partial^{2 k+1}\,\eta(\sigma)}{\partial\sigma^{2 k+1}}$$
where $\eta(\sigma)=\left(1-2^{1-\sigma}\right)\ \zeta(\sigma)$ is the Dirichlet eta function.