Yes. We just use a Baire Category argument (a similar technique also works in high dimensions). Consider the complete metric space $X$ of pairs $(E,\mu)$, where $\mu$ is a probability measure supported on $E$ such that
$$ \sup_{\xi \in \mathbf{Z}} |\widehat{\mu}(\xi)| |\xi|^{s/2} < \infty, $$
and $E$ is a compact subset of $[0,1]$. We define a distance function
$$ d((E_1,\mu_1),(E_2,\mu_2)) = \max \left( d_H(E_1,E_2), \sup_{\xi \in \mathbf{Z}} |\widehat{\mu_1}(\xi) - \widehat{\mu_2}(\xi)| |\xi|^{s/2} \right) $$
where $d_H$ is the Hausdorff metric between two sets. It is a useful heuristic that a generic set is as `thin as possible' with respect to the Hausdorff metric. It is simple to see that for any $(E,\mu)$ in $X$, the Fourier dimension of $E$ is at least equal to $s$, so we should expect quasi-all elements of $X$ have dimension $s$.
For each $t > s$, $\delta > 0$, and $\varepsilon > 0$, set
$$ A(t,\delta,s) = \{ (E,\mu) \in \mathcal{X} : |E_\delta| < \varepsilon \cdot \delta^s \} $$
where $E_\delta$ is the $\delta$ thickening of $E$. Then $A(t,\delta,s)$ is an open subset of $X$, and
$$ \bigcap_{n = 1}^\infty \bigcap_{m = 1}^\infty \bigcap_{k = 1}^\infty A(s+1/n,1/m,1/k) $$
is the set of all pairs $(E,\mu)$ in $X$ where $E$ has Minkowski dimension $s$. Thus it suffices to argue that $A(t,\delta,\varepsilon)$ is dense in $X$ for all required parameters. It is slightly technical to argue this, but the basic idea is to consider a random construction which, given a pair $(E_0,\mu_0)$, considers the random measure
$$ \mu = \mu_0 \cdot \sum_{k = 1}^K \phi_{\varepsilon_0}(x - x_k) $$
where $x_1,\dots, x_K$ are uniformly distributed on $[0,1]$, $\varepsilon_0 = K^{-1/s}$, and $\phi_{\varepsilon_0}$ is a smooth bump function supported on a ball radius $\varepsilon_0$. One then shows that with high probability that
$$ \sup_{\xi \in \mathbf{Z}} |\widehat{\mu}(\xi) - \widehat{\mu_0}(\xi)| = o(1) $$
as $K \to \infty$, and that $d_H(\text{supp}(\mu), \text{supp}(\mu_0)) \to 0$.