Sections and subgroups in a unipotent group Let $U$ be a smooth connected unipotent algebraic group over an algebraic closure $k$ of $\mathbf{F}_p$. Let $U' := [U,U]$ be the derived (= commutator) subgroup, and assume it is central in $U$. Let $V$ be a subgroup of the abstract group $U(k)/U'(k) = (U/U')(k)$.
Is there a subgroup $H$ of $U(k)$ such that
(a) $\pi(H) = V$, 
(b) $H\cap U' =[H,H]$?         
Note that $H\cap U'$ must contain $[H,H]$, which depends only on $V$ due to the centrality of $U'$ in $U$. So if we define the subgroup $\widetilde{V} = \pi^{-1}(V)$ in $U(k)$ then the question is really asking if $\widetilde{V}$ contains a subgroup $H$ that maps onto $V$ and meets $U'$ in precisely the commutator subgroup $[\widetilde{V}, \widetilde{V}]$.  
The case of interest is $U = \mathcal{U}/[\mathcal{U},\mathcal{D}(\mathcal{U})]$, where $\mathcal{U}$ is the unipotent radical of a Borel subgroup of a connected semisimple $k$-group.
 A: Here is an example of a "2-step nilpotent" unipotent group $E_1$ for which
the quotient $V=E_1/[E_1,E_1]$ is a vector group (so every element of $V(k)$
is $p$-torsion) but for which not every element of $V(k)$ may be lifted
to a $p$-torsion element of $E_1(k)$.
This confirms BCnrd's skepticism in one of the comments. I admit that this 
example may well not arise as a subgroup of $U/[U,[U,U]]$ for the unipotent
radical $U$ of a Borel (though I don't see precisely how to argue that it doesn't).
To form $E_1$,  I want to construct an extension of a vector group by the 
additive group $\mathbf{G}_a$
using the sum of two 2-cocycles. I'll first describe each of these separately.
First, recall that the additive group of length
2 Witt vectors $W_2$ is a self-extension of $\mathbf{G}_a$
$$0 \to \mathbf{G}_a \to W_2 \to \mathbf{G}_a \to 0$$
defined by a certain 2-cocycle $\sigma$. Addition is given by
$(a_0,a_1) + (b_0,b_1) = (a_0 + b_0,\sigma(a_0,b_0) + a_1 + b_1)$ where
$\sigma(X,Y) = \dfrac{1}{p}(X^p + Y^p - (X+Y)^p) \in \mathbf{Z}[X,Y]$.
Next, let $V$ be a finite dimensional $k$ vector space with $\dim V \ge 2$, viewed as a vector group over $k$.
Let $\beta$ be a non-deg alternating form on $V$. Then $\beta$ defines
a non-commutative central extension
$$1 \to \mathbf{G}_a \to E \to V \to 1$$
which I'll write multiplicatively: the operation will be given by
$(v,a)\cdot(w,b) = (v+w,\beta(v,w) + a + b)$. (I'm identifying
the variety $E$ with $V \times \mathbf{G}_a$).
The extension I want is a hybrid.
Fix a non-zero linear functional $\phi:V \to k$ and consider the extension
$$1 \to \mathbf{G}_a \to E_1 \xrightarrow{\pi} V \to 1$$
with operation given by
$(v,a)(w,b) = (v+w,\sigma(\phi(v),\phi(w)) + \beta(v,w) + a + b)$.
Since $\beta$ is non-degenerate we have $E_1/[E_1,E_1] \simeq V$. If $L \subset V$
is a line for which $\phi(L) \ne 0$, the subgroup
$\pi^{-1}(L) \subset E_1$ is isomorphic to $W_2$. In  particular,
any element $(v,a) \in E_1(k)$ with $\phi(v) \ne 0$
has order $p^2$.
