A while ago, I was reading Majid's book Foundations of quantum group theory, and Section 9.4 has a rather fascinating description of a Tannaka-Krein reconstruction result for quantum groups. In particular, there seems to be the claim that if $H$ is a quasi-triangulated quasi-Hopf algebra, then the braided endomorphisms of the identity functor on (a suitably large category of) $H$-comodules form a Hopf algebra object $H'$ in $H$-comodules, in a way that identifies $H'$-comodules with $H$-comodules. Furthermore, $H'$ is commutative and cocommutative with respect to the braided structure on the category of $H$-comodules, and under some nondegeneracy assumptions, it is self-dual. This is called "transmutation" because $H'$ appears to have nicer properties than $H$ (although it may live in a strange category). Some examples are given, e.g., $U_q(g)$ and quantum doubles of finite groups. Unfortunately, the arguments in the proof are given in a diagrammatic language that I was unable to fathom.
Why does this result seem problematic?
The first problem comes from reasoning by analogy. If I want to describe a Hopf algebra object in a monoidal category, I need some kind of commutor transformation $V \otimes W \to W \otimes V$ to even express the compatibility between multiplication and comultiplication, e.g., that comultiplication is an algebra map. In operad language, I need (something resembling) an E[2]-structure on the category to describe compatible E[1]-algebra and E[1]-coalgebra structures. If you think of the spaces in the E[k] operad as configurations of points in $\mathbb{R}^k$, this is roughly saying that you need two dimensions to describe compatible one-dimensional operations. In the above case, the category of $H$-comodules has an E[2]-structure, but I'm supposed to get compatible E[2]-algebra and E[2]-coalgebra structures. Naively, I would expect an E[4]-category to be necessary to make sense of this, but I was unable to wrestle with this successfully.
The second problem comes from a construction I've heard people call Koszul duality, or maybe just Bar and coBar. If we are working in an E[n]-category for n sufficiently large (like infinity, for the symmetric case), then there is a "Bar" operation that takes Hopf algebras with compatible E[m+1]-algebra and E[k]-coalgebra structures, and produces Hopf algebras with compatible E[m]-algebra and E[k+1]-coalgebra structures. There is a "coBar" operation that does the reverse, and under some conditions that I don't understand, composing coBar with Bar (or vice versa) is weakly equivalent to the identity functor. In the above case, I could try to apply Bar to $H'$, but the result cannot have an E[3]-coalgebra structure, since E[3] doesn't act on the category. Applying Bar then coBar implies the coalgebra structure on $H'$ is a priori only E[1], and applying coBar then Bar implies the algebra structure on $H'$ is a priori only E[1]. It is conceivable (in my brain) that the E[2]-structures could somehow appear spontaneously, but that seems a little bizarre.
Question
Am I talking nonsense, or is there a real problem here? (or both?)