Dear Workitout: The list of comments above is getting unwieldy, so let me post an answer here, now that you have finally identified 1.10.1 in Katz-Mazur as (at least one) source of the question. As I predicted, you'll see that the basic technique to be used adapts to many other settings, and that it is very hard to formulate a "meta-theorem" to cover all cases. The only sure-fire method I know is to read all of sections 8, 9, 11, 12 in EGA IV$_3$ and sections 17 and 18 in EGA IV$_4$, and then it becomes really routine. Maybe there's a better method (well I can think of one, but I won't say it here). I will use the terminology and notation around 1.10.1 from Katz-Mazur without explanation below.
Being a "full set of sections" of $Z/S$ is something which is sufficient to check using the constituents of a single open affine cover of $S$, and also a finite generating set of the coordinate ring of $Z$ over each such open. Thus, by working Zariski-locally on $S$ we may assume $S = {\rm{Spec}}(R)$ and that both sides of (1) in KM 1.10.1 have $R$-free coordinate rings (when viewed as finite $R$-schemes), and likewise for their sum (as effective Cartier divisors). Now the assertions (1) and (2) in KM 1.10.1 are identities among finitely many elements of some finite free $R$-modules. For instance, (1) asserts that certain elements in a finite free $R$-module have vanishing image in a finite free $R$-module quotient. This is all now a bunch of identities among finitely many elements of $R$.
OK, finally we come to the part with a real idea. Consider the subring $R_0$ of $R$ generated over $\mathbf{Z}$ generated by those finitely many elements. It is noetherian. Now unfortunately your initial algebro-geometric setup over $R$ (the smooth separated finite-type curve $C$, the various effective relative Cartier divisors, etc.) probably does not arise via base change from the exact same setup (including flatness properties!) over $R_0$. But that doesn't matter: what would really be swell is if some noetherian subring of $R$ which contains $R_0$ permits such a descent of the situation. Now express $R$ as the direct limit of its finitely generated $R_0$-subalgebras (all of which are noetherian). Does the entire situation descend to one of those? If it did, we'd be in great shape, since it would then suffice to solve the problem in the case of a noetherian base ring (as that would imply the result over $R$ by suitable base change of the descent from the noetherian subring back up to $R$).
How to implement this strategy of reduction to the noetherian case (after which we'll need to deal with the passage to artin local base with algebraically closed residue field)? OK, so that's where we are all very fortunate that Grothendieck actually wrote out the entire formalism in total detail to handle basically every such situation one could ever want to handle. So it becomes kind of a game in finding the references in EGA (which I admit is hard to do if one doesn't know where to look, but is really easy if one has read the right parts). For your particular situation with some smooth separated curves and some relative effective Cartier divisors, etc., the results you need are: EGA IV$_3$ 8.3.4, 8.9.1, 8.10.5 (e.g., (v)), 9.2.6.1, 11.2.6(ii), and IV$_4$ 17.7.9.
I'm not going to say more about how you combine those references here; that is where I again remind you of your pseudonym.
OK, now $R$ is noetherian (even finite type over $\mathbf{Z}$, which is very useful extra stuff to have for other arguments with excellence later in life), and you're trying to prove some finite collection of identities among elements of $R$. To do that it suffices to check in the local rings of $R$, so you can assume $R$ is local. Now a pair of elements of a local noetherian ring are equal if and only if they have equal images in each artinian quotient (Krull intersection theorem). So it suffices to prove the general result over arbitrary artin local rings (really just the artinian quotients of finitely generated $\mathbf{Z}$-algebra, so there's no set-theoretic quantification nonsense going on). Now $R$ is artin local. To check an identity in a ring it suffices to do so in a faithfully flat extension ring. So finally we haul out EGA 0$_{\rm{III}}$ 10.3.1 to find a faithfully flat artin local extension with an algebraically closed residue field. That's it!
I presume you can now see why anyone who knows how to fill in such arguments never actually writes them out in papers: it is much simpler to say "by standard limit methods from EGA IV$_3$, sections 8,9, etc." (maybe even to be a bit more specific, as K-M are at the beginning of their 1.8.1), and to trust that the reader will pick up the clue that they should read those parts of EGA if they want to understand what is going in such arguments for themself. It is bad when people don't at least mention the relevance of sections 8, 9, etc., but things could be worse (e.g., Grothendieck could have not written EGA, leaving stuff in a complete mess reference-wise).