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Apr 7, 2017 at 17:43 history edited Alex R. CC BY-SA 3.0
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Apr 7, 2017 at 15:38 answer added Gurjeet Singh timeline score: 10
Apr 7, 2017 at 1:00 comment added Alex R. @SteveHuntsman: Thanks! TPE looks interesting in how it better preserves density than tSNE. However, it looks like TPE is O(n^3) whereas the Barnes Hut implementation of tSNE is O(n*log(n)) making it much more attractive. I forget the complexity of TDA but if I recall correctly it's at least n^2. So one of the ulterior motives behind my question is to understand how much is lost in terms of topological structure, because it's way faster to run tSNE.
Apr 6, 2017 at 12:08 comment added Steve Huntsman A different nonlinear dimensionality reduction called tree preserving embedding (dx.doi.org/10.1073/pnas.1018393108) is essentially (i.e., up to practical details) functorial in the sense of Carlsson and Memoli. I have slides detailing this; email me if you want them.
Apr 5, 2017 at 18:40 history asked Alex R. CC BY-SA 3.0