No, even for $A=\mathbf{Z}$.
Take your favourite example of a complex of short exact sequences of abelian groups whose projective limit is not exact (see for example this math.stackexchange questionthis math.stackexchange question).
Now just make a complex of long exact sequences by splicing together the short exact sequences a la
$$\to0\to A\to B\to C\to 0\to 0\to A\to B\to C\to 0\to\cdots$$
and you get failure of exactness of the projective limit all over the place, even though all the sequences in the complex are exact.