In the conditions of Kadec's result , you can write $A=(I-S)^{-1}=\sum_{m=0}^\infty S^m,$ where $S(f)(x)=\sum_{n=-\infty}^\infty \hat f(n) (e^{inx}-e^{i\lambda_n x})$ verifies $\Vert S\Vert<1.$ Here $\{ \hat f (n)\} $ are the Fourier coefficients of $f$.
Then $A(e^{\lambda_n x})= e^{n x}$$A(e^{i\lambda_n x})= e^{in x}$ and so $A$ orthogonalizes the Riesz basis. The fact that $\Vert S\Vert<1$ can be found for example in Benzinger, Nonharmonic Fourier series ans Spectral Theory, 1987, TAMS.