A standard model of ZF need not be transitive, of course, and Joel David Hamkins' answer to Large cardinal axioms and Grothendieck universesLarge cardinal axioms and Grothendieck universes gives Tarski sets as an interesting example.
I should clarify since the terminology is not entirely standard. By a standard model I mean what Wikipedia does, and what Joel David Hamkins does in his answer to Standard model of ZFCStandard model of ZFC: the set membership relation $E$ of the model is the actual set membership relation $\in$, restricted to sets in $M$.
Does existence of a standard model imply existence of a transitive one? Existence of a Tarski set does imply existence of a Grothendieck universe. But am I right to suspect that if there is a standard model, then the ordinals in the minimal model are not a true initial segment of the ordinals, so the minimal model is not transitive, and we can cut down to where that minimal model is the only standard one? If I understand Guest289 correctly, his argument shows my guess is wrong, since a minimal model is transitive. Do I understand that correctly? Or does this come back to unclarity abut what is a standard model?
Anyway, does existence of a transitive model have higher consistency strength than existence of a standard model? I would not be surprised if the axiom of choice lays a role here but I do not know if it does.