Yes, this is possible. (Notice that your question implicitly requires $k[G]$ to be an integral domain, otherwise you cannot take its fraction field.)
Let $k$ be a non-perfect field of characteristic $p$, and let $a \in k \setminus k^p$. Consider the algebraic group $G$ of $p$-th roots of $a$, i.e. if you describe the algebraic algebraic group defined as a functor from $k$-algebras to groups, then you define via $$ G(R) = \{ r \in R \mid r^p = a \} $$$$ G(R) = \{(r,r') \in R^2 \mid r^p = a{r'}^p \} $$ for all $R \in k\mathrm{-alg}$.
Then $k[G] \cong k[t]/(t^p-a)$$k[G] \cong k[t,t']/(t^p-a{t'}^p)$, which is a purely inseparable extensiondomain whose fraction field of $k$$k(a^{1/p})(t)$ is visibly not separable over (and therefore equal to its own fraction field)$k$.