The space of configurations of $k$ distinct points in the plane $$F(\mathbb{R}^2,k)=\lbrace(z_1,\ldots , z_k)\mid z_i\in \mathbb{R}^2, i\neq j\implies z_i\neq z_j\rbrace$$ is a well-studied object from several points of view. Paths in this space correspond to motions of a set of point particles moving around avoiding collisions, and its fundamental group is the pure braid group. It is not hard to prove that this space is homotopy equivalent to the configuration space of the unit disk $$F(D^2,k)=\lbrace(z_1,\ldots , z_k)\mid z_i\in D^2, i\neq j\implies z_i\neq z_j\rbrace$$
In real life however, particles, or any other objects which move around in some bounded domain without occupying the same space, have a positive radius, and so would be more realistically modelled by disks rather than points. This motivates the study of the spaces $$F(D^2,k;r)= \lbrace(z_1,\ldots , z_k)\mid z_i\in D^2, i\neq j\implies |z_i - z_j|>r\rbrace$$ where $r>0$. The homotopy type of this space is a function of $r$ and $k$. Fixing $k$ and varying $r$ gives a spectrum (is this the right word?) of homotopy types between $F(\mathbb{R}^2,k)$ and the empty space. It seems like an interesting (and difficult) problem to study the homotopy invariants as functions of $r$. For instance, for $k=3$ what is $\beta_1(r)$, the first Betti number of $F(D^2,k;r)$?
Question: Have these spaces and their homotopy invariants been studied before? If so, where?
Of course one can also ask the same question with disks of arbitrary dimensions.

